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  • Cytochrome c oxidase subunit 1 analysis of Xiphinema diversicaudatum, X. pachtaicum, X. simile and X. vuittenezi (Nematoda, Dorylaimida).

    Author(s) : Shesh KumariDecraemer, W.Luca, F. deTiefenbrunner, W.

    Author Affiliation : Division of Plant Health, Crop Research Institute, Dmovska 507, Ruzyne, 16106 Prague 6, Czech Republic.

    Author Email : kumari@vurv.cz

    Journal article : European Journal of Plant Pathology 2010 Vol.127 No.4 pp.493-499 ref.15

    Abstract : Genetic analyses using sequences of partial cytochrome ccytochrome cSubject Category: Chemicals and Chemical Groups
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    oxidase subunit 1 (cox1) gene of mitochondrial DNAmitochondrial dnaSubject Category: Chemicals and Chemical Groups
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    were conducted to determine the extent of genetic variationgenetic variationSubject Category: Properties
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    within and among Xiphinema diversicaudatumxiphinema diversicaudatumSubject Category: Organism Names
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    , X. pachtaicum, X. simile and X. vuittenezi populations. Pairwise distance among the four species was 22.5 to 31.2%. Four different sequence variants of cox1 were determined among six populations of X. diversicaudatum and three variants among three populations of X. simile. Nucleotide variation was detected at 18 of 414 bp (1.9 to 2.7%) in X. diversicaudatum and 4 of 435 bp (0.2 to 0.9%) in X. simile. All changes were at silent sites. No nucleotide variation was detected within three populations of X. pachtaicum and within three populations of X. vuittenezi.

    ISSN : 0929-1873

    DOI : 10.1007/s10658-010-9614-0

    Record Number : 20103260696

    Publisher : Springer

    Location of publication : Amsterdam

    Country of publication : The Netherlands

    Language of text : English

    Indexing terms for this abstract:

    Organism descriptor(s) : DorylaimidadorylaimidaSubject Category: Organism Names
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    , NematodanematodaSubject Category: Organism Names
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    , XiphinemaxiphinemaSubject Category: Organism Names
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    , Xiphinema diversicaudatumxiphinema diversicaudatumSubject Category: Organism Names
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    , Xiphinema similexiphinema simileSubject Category: Organism Names
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    Descriptor(s) : cytochrome ccytochrome cSubject Category: Chemicals and Chemical Groups
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    , cytochrome-c oxidasecytochrome-c oxidaseSubject Category: Chemicals and Chemical Groups
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    , DNAdnaSubject Category: Chemicals and Chemical Groups
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    , genesgenesSubject Category: Miscellaneous
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    , genetic variationgenetic variationSubject Category: Properties
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    , mitochondriamitochondriaSubject Category: Anatomical and Morphological Structures
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    , mitochondrial DNAmitochondrial dnaSubject Category: Chemicals and Chemical Groups
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    , oxidoreductasesoxidoreductasesSubject Category: Chemicals and Chemical Groups
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    , parasitesparasitesSubject Category: Organism Groups
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    , plant parasitesplant parasitesSubject Category: Organism Groups
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    , plant parasitic nematodesplant parasitic nematodesSubject Category: Organism Groups
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    , plant pathologyplant pathologySubject Category: Disciplines, Occupations and Industries
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    Identifier(s) : Adenophorea, cytochrome oxidase, deoxyribonucleic acid, eelworms, genetic variability, genotypic variability, genotypic variation, nematodes, phytopathology, redox enzymes

    Geographical Location(s) : Czech Republicczech republicSubject Category: Geographic Entities
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    Broader term(s) : DorylaimiadorylaimiaSubject Category: Organism Names
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    , EnopleaenopleaSubject Category: Organism Names
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    , NematodanematodaSubject Category: Organism Names
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    , invertebratesinvertebratesSubject Category: Organism Names
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    , animalsanimalsSubject Category: Organism Names
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    , eukaryoteseukaryotesSubject Category: Organism Names
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    , LongidoridaelongidoridaeSubject Category: Organism Names
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    , DorylaimidadorylaimidaSubject Category: Organism Names
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    , XiphinemaxiphinemaSubject Category: Organism Names
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    , Central Europecentral europeSubject Category: Geographic Entities
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    , EuropeeuropeSubject Category: Geographic Entities
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    , Developed Countriesdeveloped countriesSubject Category: Miscellaneous
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    , European Union Countrieseuropean union countriesSubject Category: Institutions and Organisations
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    , OECD Countriesoecd countriesSubject Category: Institutions and Organisations
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