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  • Matrix frequency analysis of genome sequences: pattern identification of Turfgrass species.

    Author(s) : Manikandakumar, K.Gokulraj, K.Srikumar, R.Muthukumaran, S.

    Author Affiliation : Department of Physics, Bharathidasan University College (W), Orathanadu, 614 625, Tanjavore, Tamil Nadu, India.

    Author Email : bioinfokm@gmail.com

    Journal article : World Applied Sciences Journal 2010 Vol.11 No.3 pp.315-320 ref.9

    Abstract : The complete genome analysis, which is one of the essential steps to know their characteristics, is very important. The genome sequence information is essential to understand the function of extensive arrangements of genes. It is significant to combine all sequence information in a precise database to provide an efficient manner of sequence similarity search. Complete genome analysis is depending on matrix frequency of sequence residue calculation. In this study, we select monocot species as the specimen for genome sequence analysis. We have generated a matrix frequency for genetic code analysis, which helps in the study of complete genome residues. Here we report the duplets and triplets codon for genetic code analysis of some monocot species. By our research, we identified the codon pattern from Turfgrass species among the other monocot species.

    ISSN : 1818-4952

    URL : http://www.idosi.org/.../10.pdf

    Record Number : 20113034081

    Publisher : IDOSI Publications

    Location of publication : Faisalabad

    Country of publication : Pakistan

    Language of text : English

    Language of summary : English

    Indexing terms for this abstract:

    Organism descriptor(s) : monocotyledons

    Descriptor(s) : codons, databases, genes, genetic code, genome analysis, genomics, lawns and turf, nucleotide sequences

    Identifier(s) : coding triplet, data banks, DNA sequences, lawns and sports turf

    Broader term(s) : angiosperms, Spermatophyta, plants, eukaryotes